진단/바이오센싱
RNA 현장 분리, 땀 분석, 면역분석 등 실시간 진단 플랫폼 중심
Room-Temperature Roll-to-Roll Additive Manufacturing of PDMS-Based Centrifugal Microfluidic Device for On-Site Isolation of RNA from Whole Blood
(전혈에서 RNA를 현장 분리하기 위한 PDMS 기반 원심 마이크로유체 장치의 상온 롤투롤 적층 제조)
연구기관
성균관대학교 (SKKU), 한국
주요 저자
Trung Hoang, Han Truong, Jiyeon Han 외
연구 목표
기존 PDMS 미세유체 장치 제작의 고비용·저효율 문제를 해결하기 위해, 열·UV 없이 상온에서 동작하는 롤투롤(R2R) 대량 생산 플랫폼 개발. 전혈 150µL에서 현장 RNA 분리 실현.
핵심 성과
세계 최초 상온 R2R PDMS 미세유체 장치 생산 플랫폼 구현. 에너지 소비 및 온실가스 방출 최소화, COVID-19 등 감염병 현장 핵산 진단에 직접 응용 가능.
저널
Materials Today Bio (2023)
사용 모델
PR110 (Legacy)
사용 레진
Master Mold for PDMS
Figure 1. Overview of the room-temperature roll-to-roll imprinted PDMS-based centrifugal microfluidic devices. (a) Roll-to-roll additive manufacturing platform; (b) Enlarged image of R2R imprint unit; (c) Rewinder unit for collecting imprinted LoaD devices; (d) Illustration of on-chip isolation of RNA from whole blood using our R2R imprinted LoaD device; (e) and (f) R2R gravure coating unit; (g) Mass production of PDMS-based centrifugal microfluidic devices on PET substrate.
Figure 1. Overview of the room-temperature roll-to-roll imprinted PDMS-based centrifugal microfluidic devices. (a) Roll-to-roll additive manufacturing platform; (b) Enlarged image of R2R imprint unit; (c) Rewinder unit for collecting imprinted LoaD devices; (d) Illustration of on-chip isolation of RNA from whole blood using our R2R imprinted LoaD device; (e) and (f) R2R gravure coating unit; (g) Mass production of PDMS-based centrifugal microfluidic devices on PET substrate.
Figure 2. Design and 3D printing of the centrifugal microfluidic devices. (a) 3D model and detailed function of lab-on-a-disc (LoaD) device; (b) 3D printed LoaD device; (c) 3D design of screw valves; (d) Demonstration of device operation by food dyes, “v.1-10” stand for valve 1–10 and fluid flow sequences were indicated by dashed lines and yellow arrow, while red color circle represent closed valve and yellow one represents for opened valve.
Figure 2. Design and 3D printing of the centrifugal microfluidic devices. (a) 3D model and detailed function of lab-on-a-disc (LoaD) device; (b) 3D printed LoaD device; (c) 3D design of screw valves; (d) Demonstration of device operation by food dyes, “v.1-10” stand for valve 1–10 and fluid flow sequences were indicated by dashed lines and yellow arrow, while red color circle represent closed valve and yellow one represents for opened valve.
Figure 3. Fabrication of multi-depth flexible polymer shim. (a) Fabrication steps of polymer mold; (b) The complete large-area flexible polymer mold; (c) Wrapped polymer shim on imprinting roller; (d) Image of multi-depth macro-to-micro features of the mold; (e) Demonstration of effective anti-adhesive coating layer for long lifecycle of the mold by replicating master template M10 to 10 copies from C1 to C10.
Figure 3. Fabrication of multi-depth flexible polymer shim. (a) Fabrication steps of polymer mold; (b) The complete large-area flexible polymer mold; (c) Wrapped polymer shim on imprinting roller; (d) Image of multi-depth macro-to-micro features of the mold; (e) Demonstration of effective anti-adhesive coating layer for long lifecycle of the mold by replicating master template M10 to 10 copies from C1 to C10.
Figure 5. Roll-to-roll (R2R) replication accuracy. (a) Cross-sectional images with different magnifications from R2R imprinted samples under different operating nip pressure. Dashed areas on the left side images present the regions shown on the right; (b) Replication accuracy measuring at three positions: waste channel, S-shaped channel, and inlet hole on CAD design, 3D printed mold, PDMS mold, and R2R replicated LoaD with five samples per each.
Figure 5. Roll-to-roll (R2R) replication accuracy. (a) Cross-sectional images with different magnifications from R2R imprinted samples under different operating nip pressure. Dashed areas on the left side images present the regions shown on the right; (b) Replication accuracy measuring at three positions: waste channel, S-shaped channel, and inlet hole on CAD design, 3D printed mold, PDMS mold, and R2R replicated LoaD with five samples per each.
종양학/CTC
순환종양세포 포획·프로파일링, 줄기세포 정량 등 액체 생검 연구
Open-Top Patterned Hydrogel-Laden 3D Glioma Cell Cultures for Creation of Dynamic Chemotactic Gradients to Direct Cell Migration
(세포 이동을 유도하기 위한 동적 화학유도 구배를 생성하는, 상단이 개방된 패턴화 하이드로겔 기반 3차원 신경교종 세포 배양)
연구기관
University of Virginia (미국) — 공학·의학 공동 연구
주요 저자
Aditya Rane, Steven Tate, Jenna L. Sumey, Qing Zhong, Hui Zong, Benjamin Purow, Steven R. Caliari, Nathan S. Swami
연구 목표
기존 PDMS 폐쇄형 미세유체 시스템의 한계 극복: 얕은 깊이(≤0.1mm)로 표면 접촉 지배, PDMS 성분 침출로 주화성(chemotaxis) 프로파일 교란. 뇌종양(교모세포종) 미세환경을 모사하는 개방형(open-top) 3D 하이드로겔 배양 플랫폼 개발.
핵심 방법
CADworks3D PR 시리즈로 PDMS 마스터 몰드 제작 → 히알루론산(HA)+GelMA 하이브리드 하이드로겔에 U87 교모세포종 세포 삽입 → 종 방향 채널로 CXCL12 케모카인 동적 기울기 형성(~1mm 깊이 전체에 균일) → AMD3100 저해제 처리로 주화성 이동 억제 검증.
핵심 성과
PDMS 없이 제곱센티미터 면적·밀리미터 깊이 규모의 3D 뇌종양 미세환경 내 동적 화학 기울기 형성 최초 구현. 교모세포종 침윤 억제 약물(chemotaxis 차단제) 스크리닝 플랫폼으로 직접 활용 가능. ACS Biomaterials Science & Engineering 게재 (2024).
저널
ACS Biomaterials Science & Engineering (2024)
사용 모델
PR110 (Legacy)
사용 레진
Master Mold for PDMS, Clear Microfluidic Resin
Figure 1. (A) Patterned cell-laden hydrogel adjoining fluidic channels. (i) A silanized glass substrate treated for adhesion to the cross-linked hydrogel is (ii) reversibly bonded to a PDMS mold that is then filled with the cell-laden hydrogel and (iii) photo-cross-linked to create the patterned hydrogel on glass. (iv) The PDMS mold is removed to leave open fluidic channels that directly adjoin the patterned hydrogel. (v) The structure is surrounded with culture medium to maintain cell viability and prevent hydrogel shrinkage. (vi) An example of the patterned hydrogel with addressable open fluidic channels through which a FITC gradient was established. (B) (i) Microfluidic flow control setup. (C) (i) 3D-printed holder for fluidic integration with the patterned hydrogel and (ii) image of the patterned hydrogel with tubing to the 3D-printed holder and channel with yellow dye.
Figure 1. (A) Patterned cell-laden hydrogel adjoining fluidic channels. (i) A silanized glass substrate treated for adhesion to the cross-linked hydrogel is (ii) reversibly bonded to a PDMS mold that is then filled with the cell-laden hydrogel and (iii) photo-cross-linked to create the patterned hydrogel on glass. (iv) The PDMS mold is removed to leave open fluidic channels that directly adjoin the patterned hydrogel. (v) The structure is surrounded with culture medium to maintain cell viability and prevent hydrogel shrinkage. (vi) An example of the patterned hydrogel with addressable open fluidic channels through which a FITC gradient was established. (B) (i) Microfluidic flow control setup. (C) (i) 3D-printed holder for fluidic integration with the patterned hydrogel and (ii) image of the patterned hydrogel with tubing to the 3D-printed holder and channel with yellow dye.
장기칩/조직공학
폐·뇌 오가노이드, 펌프·모듈 시스템 등 in vitro 생체 모사
Microfabricated Dynamic Brain Organoid Cocultures to Assess the Effects of Surface Geometry on Assembloid Formation
(표면 기하구조가 어셈블로이드 형성에 미치는 영향을 평가하기 위한 미세가공 동적 뇌 오가노이드 공배양)
연구기관
McGill University (캐나다) — Christopher Moraes / Thomas M. Durcan 공동 연구그룹
주요 저자
Camille Cassel de Camps, Sabra Rostami, Vanessa Xu, Chen Li, Paula Lépine, Thomas M. Durcan, Christopher Moraes
연구 목표
여러 오가노이드를 융합한 어셈블로이드(assembloid) 형성 과정은 불분명. 두 종류 오가노이드(중뇌+비유도 뇌 오가노이드)를 별도 채널에서 배양하면서 표면 형상을 제어하고, 격벽 제거 후 융합을 관찰하는 동적 미세제작 플랫폼 개발.
핵심 방법
CADworks3D ProFluidics 285D + Master Mold Resin으로 PDMS 몰드 제작(층 두께 50µm). 분리 가능한 삽입 격벽(삼각형·평면 등 다양한 형상)이 오가노이드 표면 형상을 형성. 격벽 제거 후 오가노이드 융합 시 축삭 돌기 방향, 세포 이동 방향 형광 현미경 정량화. iPSC 유래 오가노이드 사용(맥길 대학 REB 승인).
핵심 성과
중뇌 오가노이드 축삭 돌기가 다른 중뇌 오가노이드 쪽으로 통계적으로 유의하게 편향됨 확인. 오가노이드 표면 형상(평면 vs 삼각형 모서리)이 세포 침투에 영향. 물리적 단서로 신경회로 발달·어셈블로이드 형성 제어 가능성 제시. Biotechnology Journal 게재 (2024).
저널
Biotechnology Journal (2024)
사용 모델
ProFluidics 285D
사용 레진
Master Mold for PDMS
Figure 1. Schematic of device for coculture and assembloid formation. Two different types of organoids are loaded into separate channels and fed by separate media reservoirs. The geometry of the wall separating the channels shapes the organoids as they grow. When mature, the separating wall can be physically removed, allowing the organoids to interact and eventually fuse, while observing their interactions throughout culture.
Figure 1. Schematic of device for coculture and assembloid formation. Two different types of organoids are loaded into separate channels and fed by separate media reservoirs. The geometry of the wall separating the channels shapes the organoids as they grow. When mature, the separating wall can be physically removed, allowing the organoids to interact and eventually fuse, while observing their interactions throughout culture.
Figure 3. Assembloid formation in two-piece separated devices. (A) 3D schematic of removable insert piece; shown here with a triangular wall geometry. (B) Replica molded two-piece PDMS devices, with base and insert pieces shown. (C) Assembled two-piece device, imaged from below. (D) Midbrain organoids were loaded into channels with Matrigel, and maintained viability for 7 days in culture. (E) Unguided and midbrain organoids were loaded into channels with Matrigel and cultured for 7 days before removing the separating wall. Organoids maintained the shape and spacing imposed by the separating wall before beginning to grow toward each other to form an assembloid. (F) Astrocytes identified with glial fibrillary acidic protein (GFAP; magenta) are observed on the edges of unguided organoids only. (G) Midbrain organoids uniquely express dopaminergic neuron marker tyrosine hydroxylase (TH; magenta). Both organoid types express neural marker β-tubulin III (Tuj1; green), which is observed across the separating bridge within 3 days of insert removal.
Figure 3. Assembloid formation in two-piece separated devices. (A) 3D schematic of removable insert piece; shown here with a triangular wall geometry. (B) Replica molded two-piece PDMS devices, with base and insert pieces shown. (C) Assembled two-piece device, imaged from below. (D) Midbrain organoids were loaded into channels with Matrigel, and maintained viability for 7 days in culture. (E) Unguided and midbrain organoids were loaded into channels with Matrigel and cultured for 7 days before removing the separating wall. Organoids maintained the shape and spacing imposed by the separating wall before beginning to grow toward each other to form an assembloid. (F) Astrocytes identified with glial fibrillary acidic protein (GFAP; magenta) are observed on the edges of unguided organoids only. (G) Midbrain organoids uniquely express dopaminergic neuron marker tyrosine hydroxylase (TH; magenta). Both organoid types express neural marker β-tubulin III (Tuj1; green), which is observed across the separating bridge within 3 days of insert removal.
Figure 4. Axonal projection from midbrain organoids. (A) Axonal projections extending from midbrain organoid, and (B) staining positive for axonal marker tau-1 (green). (C) Axonal projections arise from all sides of the midbrain organoid. (D) Representative frequency distribution of angles of axonal projections from a midbrain organoid, showing majority of axons angled towards nearby organoid (distribution is centered around angle towards nearby organoids, 180°). Compared against a statistically random orientation, the distribution is biased toward other midbrain organoids (p < 0.05) and unguided organoids (p 0.1 by two-sample t-test comparing axon lengths that were directed toward either midbrain or unguided organoids).
Figure 4. Axonal projection from midbrain organoids. (A) Axonal projections extending from midbrain organoid, and (B) staining positive for axonal marker tau-1 (green). (C) Axonal projections arise from all sides of the midbrain organoid. (D) Representative frequency distribution of angles of axonal projections from a midbrain organoid, showing majority of axons angled towards nearby organoid (distribution is centered around angle towards nearby organoids, 180°). Compared against a statistically random orientation, the distribution is biased toward other midbrain organoids (p < 0.05) and unguided organoids (p 0.1 by two-sample t-test comparing axon lengths that were directed toward either midbrain or unguided organoids).
유체역학/미세유체
모세관 흐름, 입자 분리, 혼합기 등 기초 유체 연구
Microfluidic Chain Reaction of Structurally Programmed Capillary Flow Events
(구조적으로 프로그래밍된 모세관 흐름 이벤트의 미세유체 연쇄 반응 )
연구기관
McGill University (캐나다) — David Juncker 연구그룹
주요 저자
Mohamed Yafia, Oriol Ymbern, Ayokunle O. Olanrewaju, Azim Parandakh, David Juncker 외
연구 목표
기존 Lab-on-chip은 자동화를 위해 외부 펌프·컴퓨터·연결선이 필수였고, 모세관 미세유체는 최대 8단계 동작만 가능. 외부 장비 없이 칩 구조 자체에 수백 단계 액체 조작 알고리즘을 인코딩하는 "미세유체 연쇄 반응(MCR)" 개념 최초 제안.
핵심 방법
3D 프린팅 일체형 칩에 모세관 도미노 밸브(CDV) 구조 내장 → 종이 펌프의 자유 에너지로 구동 → 흐름 이벤트가 다음 단계를 조건부로 개시하는 연쇄 구조. 300개 분주 순차 방출, SARS-CoV-2 항체 8단계 자동 ELISA, 트롬빈 생성 연속 서브샘플링 어세이 실연.
핵심 성과
세계 최초 펌프·컴퓨터 없이 300단계 이상 자율 연속 액체 조작 구현. PCR에 빗댄 "MCR" 개념 정립으로 저개발국·현장 진단 Lab-on-chip 패러다임 전환 제시. Nature 게재 (2022). McGill 대학에 특허 등록·라이선스됨.
저널
Nature (2022)
사용 모델
M Series
사용 레진
Clear Microfluidics Resin
Fig. 2. Circuit analysis and experiments identify operational window for MCRs. (a) The simplified equivalent electrical circuit of the MCR units shown in Fig. 1. (b) Experimental SV burst pressure (1) and RBV retention pressure (2) for valves with conduits with different, square cross-sections fitted with a numerical and an analytical model, respectively. (c) Illustration of failure for a CDV with long serpentine functional connections with very high resistance leading to liquid breach inside the air link, and premature draining of reservoir n+1. (d) Tests of 6 MCRs with increasing RFC and three different paper pumps to determine the effect of varying the flow rate (n=3 for each paper pump and RFC). All data points are shown in (b and d). Error bars are standard deviations from 3 experiments, the centre of each error bar is the mean value. As predicted, the CDVs fail when the pressure drop across the functional connection PFC(n) exceeds the CDV threshold pressure PBURS(n) + PRBV(n+1).
Fig. 2. Circuit analysis and experiments identify operational window for MCRs. (a) The simplified equivalent electrical circuit of the MCR units shown in Fig. 1. (b) Experimental SV burst pressure (1) and RBV retention pressure (2) for valves with conduits with different, square cross-sections fitted with a numerical and an analytical model, respectively. (c) Illustration of failure for a CDV with long serpentine functional connections with very high resistance leading to liquid breach inside the air link, and premature draining of reservoir n+1. (d) Tests of 6 MCRs with increasing RFC and three different paper pumps to determine the effect of varying the flow rate (n=3 for each paper pump and RFC). All data points are shown in (b and d). Error bars are standard deviations from 3 experiments, the centre of each error bar is the mean value. As predicted, the CDVs fail when the pressure drop across the functional connection PFC(n) exceeds the CDV threshold pressure PBURS(n) + PRBV(n+1).
Fig. 3. Large-scale MCR and COVID-19 serology assay in saliva. (a) A MCR of 300 aliquots stored in 4.9 µl reservoirs across four chained and interconnected chips. See Video S2. (b) SARS-CoV-2 antibody detection in saliva. Sequential, preprogrammed release of reagents via MCR is triggered by connecting the paper pump, see Video S3. The MCR supplies 4 reagents and 4 buffers in sequence. The functionality includes delivery and removal (by flushing) of solutions, metering (40 µl – 200 µl) via reservoir size, flow speed and time control via the flow resistance of the functional connection and the capillary pressure of the paper pump. The enzymatic amplification produces a brown precipitate line visible to the naked eye. (c) Assay results and binding curve obtained by spiking antibody into saliva, and imaging by scanner and cell phone with representative images of the detection zone for each concentration, indicating the potential for quantitative point-of-care assays. (d) An assembled chip filled with colored solutions highlighting the channels for the different reagents and washing buffer.
Fig. 3. Large-scale MCR and COVID-19 serology assay in saliva. (a) A MCR of 300 aliquots stored in 4.9 µl reservoirs across four chained and interconnected chips. See Video S2. (b) SARS-CoV-2 antibody detection in saliva. Sequential, preprogrammed release of reagents via MCR is triggered by connecting the paper pump, see Video S3. The MCR supplies 4 reagents and 4 buffers in sequence. The functionality includes delivery and removal (by flushing) of solutions, metering (40 µl – 200 µl) via reservoir size, flow speed and time control via the flow resistance of the functional connection and the capillary pressure of the paper pump. The enzymatic amplification produces a brown precipitate line visible to the naked eye. (c) Assay results and binding curve obtained by spiking antibody into saliva, and imaging by scanner and cell phone with representative images of the detection zone for each concentration, indicating the potential for quantitative point-of-care assays. (d) An assembled chip filled with colored solutions highlighting the channels for the different reagents and washing buffer.
Fig. 4. Automated thrombin generation assay (TGA) by continuous analysis of plasma subsamples (thrombochip). (a) Model thrombin generation curve (thrombograms) for plasma with normal (red) and disordered (blue) coagulation. Grey box is the time window of the thrombochip. (b) TGA operations and algorithm encoded in the thrombochip. (c) Schematic of the thrombochip with inset and (d) showing (i) timer, (ii) simultaneous release of defibrinated plasma and reagents (quencher and substrate), (iii) mixing, and (iv) flow-stop in the reaction chamber and monitoring of the fluorescence time-course signal. (e) Fluorescent thrombin substrate turnover in the ten 1 min-interval subsamples; the slope of each curve is proportional to thrombin concentration, and is one data point in the thrombogram. Abridged thrombograms of defibrinated human plasma that is (f) normal (3 replicates of pooled plasma), factor-depleted (F5, F8, F9; single measurement for each factor), and (g) mixed with anticoagulant drug (Enoxaparin) at different concentrations (single measurement at each concentration). The thrombin generation time-courses are concordant with expectations.
Fig. 4. Automated thrombin generation assay (TGA) by continuous analysis of plasma subsamples (thrombochip). (a) Model thrombin generation curve (thrombograms) for plasma with normal (red) and disordered (blue) coagulation. Grey box is the time window of the thrombochip. (b) TGA operations and algorithm encoded in the thrombochip. (c) Schematic of the thrombochip with inset and (d) showing (i) timer, (ii) simultaneous release of defibrinated plasma and reagents (quencher and substrate), (iii) mixing, and (iv) flow-stop in the reaction chamber and monitoring of the fluorescence time-course signal. (e) Fluorescent thrombin substrate turnover in the ten 1 min-interval subsamples; the slope of each curve is proportional to thrombin concentration, and is one data point in the thrombogram. Abridged thrombograms of defibrinated human plasma that is (f) normal (3 replicates of pooled plasma), factor-depleted (F5, F8, F9; single measurement for each factor), and (g) mixed with anticoagulant drug (Enoxaparin) at different concentrations (single measurement at each concentration). The thrombin generation time-courses are concordant with expectations.